{"id":"https://openalex.org/W2096099115","doi":"https://doi.org/10.1093/bioinformatics/bts013","title":"IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data","display_name":"IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data","publication_year":2012,"publication_date":"2012-01-16","ids":{"openalex":"https://openalex.org/W2096099115","doi":"https://doi.org/10.1093/bioinformatics/bts013","mag":"2096099115","pmid":"https://pubmed.ncbi.nlm.nih.gov/22253290"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/bts013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts013","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/5/729/48880730/bioinformatics_28_5_729.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/28/5/729/48880730/bioinformatics_28_5_729.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100411833","display_name":"Dan Wang","orcid":"https://orcid.org/0000-0002-5934-9085"},"institutions":[{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]},{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Dan Wang","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100653025","display_name":"Li Yan","orcid":"https://orcid.org/0000-0002-4792-9998"},"institutions":[{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]},{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Li Yan","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056585446","display_name":"Qiang Hu","orcid":"https://orcid.org/0000-0002-4090-5539"},"institutions":[{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]},{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qiang Hu","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105696997","display_name":"Lara E. Sucheston","orcid":null},"institutions":[{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]},{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lara E. Sucheston","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101438779","display_name":"Michael J. Higgins","orcid":"https://orcid.org/0000-0002-3571-018X"},"institutions":[{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]},{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael J. Higgins","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036294770","display_name":"Christine B. Ambrosone","orcid":"https://orcid.org/0000-0003-1717-9943"},"institutions":[{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]},{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christine B. Ambrosone","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081220639","display_name":"Candace S. Johnson","orcid":"https://orcid.org/0000-0002-1211-4692"},"institutions":[{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]},{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Candace S. Johnson","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005267006","display_name":"Dominic J. Smiraglia","orcid":"https://orcid.org/0000-0001-8852-1510"},"institutions":[{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]},{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dominic J. Smiraglia","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100339575","display_name":"Song Liu","orcid":"https://orcid.org/0000-0001-6351-2941"},"institutions":[{"id":"https://openalex.org/I4210145812","display_name":"Cancer Genetics (United States)","ror":"https://ror.org/05feyya22","country_code":"US","type":"company","lineage":["https://openalex.org/I4210145812"]},{"id":"https://openalex.org/I1292894508","display_name":"Roswell Park Comprehensive Cancer Center","ror":"https://ror.org/0499dwk57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1292894508"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Song Liu","raw_affiliation_strings":["1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA"],"affiliations":[{"raw_affiliation_string":"1 Department of Biostatistics, 2Department of Cancer Prevention and Control, 3Department of Molecular and Cellular Biology, 4Department of Pharmacology and Therapeutics and 5Department of Cancer Genetics, Roswell Park Cancer Institute, Buffalo, NY 14263, USA","institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5100411833"],"corresponding_institution_ids":["https://openalex.org/I1292894508","https://openalex.org/I4210145812"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":16.2388,"has_fulltext":true,"cited_by_count":325,"citation_normalized_percentile":{"value":0.99529168,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"28","issue":"5","first_page":"729","last_page":"730"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11928","display_name":"Genetic Syndromes and Imprinting","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.6878892779350281},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.651594340801239},{"id":"https://openalex.org/keywords/illumina-methylation-assay","display_name":"Illumina Methylation Assay","score":0.5974975824356079},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5697647333145142},{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.5558755397796631},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.5184676051139832},{"id":"https://openalex.org/keywords/cpg-site","display_name":"CpG site","score":0.491586297750473},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.46739205718040466},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.45632150769233704},{"id":"https://openalex.org/keywords/illumina-dye-sequencing","display_name":"Illumina dye sequencing","score":0.4530676007270813},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.38574498891830444},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3363129496574402},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.3011554777622223},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.23456326127052307},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12242984771728516},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09552299976348877},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.0941191017627716}],"concepts":[{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.6878892779350281},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.651594340801239},{"id":"https://openalex.org/C136953436","wikidata":"https://www.wikidata.org/wiki/Q6000286","display_name":"Illumina Methylation Assay","level":5,"score":0.5974975824356079},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5697647333145142},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.5558755397796631},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.5184676051139832},{"id":"https://openalex.org/C140173407","wikidata":"https://www.wikidata.org/wiki/Q1138358","display_name":"CpG site","level":5,"score":0.491586297750473},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46739205718040466},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.45632150769233704},{"id":"https://openalex.org/C106337198","wikidata":"https://www.wikidata.org/wiki/Q13564012","display_name":"Illumina dye sequencing","level":4,"score":0.4530676007270813},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.38574498891830444},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3363129496574402},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.3011554777622223},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23456326127052307},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12242984771728516},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09552299976348877},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.0941191017627716}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/bts013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts013","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/5/729/48880730/bioinformatics_28_5_729.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22253290","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22253290","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:2581823","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3289916","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/bts013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/bts013","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/28/5/729/48880730/bioinformatics_28_5_729.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096099115.pdf","grobid_xml":"https://content.openalex.org/works/W2096099115.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1985444222","https://openalex.org/W1998781826","https://openalex.org/W2017502278","https://openalex.org/W2038608603","https://openalex.org/W2065498897","https://openalex.org/W2074746593","https://openalex.org/W2095682261","https://openalex.org/W2096715243","https://openalex.org/W2106608030","https://openalex.org/W2114339750","https://openalex.org/W2127925738","https://openalex.org/W2128103604","https://openalex.org/W2140892567","https://openalex.org/W2141410747","https://openalex.org/W2148521032","https://openalex.org/W2150313386","https://openalex.org/W2160697532","https://openalex.org/W4230408838"],"related_works":["https://openalex.org/W2163125553","https://openalex.org/W3210858261","https://openalex.org/W2372374335","https://openalex.org/W2314636620","https://openalex.org/W2097998761","https://openalex.org/W2921468924","https://openalex.org/W2161057402","https://openalex.org/W2124305467","https://openalex.org/W1970084637","https://openalex.org/W1617115804"],"abstract_inverted_index":{"IMA":[0],"is":[1,8],"implemented":[2],"in":[3],"the":[4],"R":[5],"language":[6],"and":[7],"freely":[9],"available":[10],"from":[11],"http://www.rforge.net/IMA.":[12]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":26},{"year":2020,"cited_by_count":19},{"year":2019,"cited_by_count":21},{"year":2018,"cited_by_count":28},{"year":2017,"cited_by_count":25},{"year":2016,"cited_by_count":46},{"year":2015,"cited_by_count":46},{"year":2014,"cited_by_count":39},{"year":2013,"cited_by_count":29},{"year":2012,"cited_by_count":7}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
