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ORCIDRamón Alain Miranda-Quintana
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2020 – today
- 2026
[j16]Fanwang Meng, Marco Martínez González, Valerii Chuiko, Alireza Tehrani, Abdul Rahman Al Nabulsi, Abigail Broscius, Hasan Khaleel, Kenneth López Pérez, Ramón Alain Miranda-Quintana, Paul W. Ayers, Farnaz Heidar-Zadeh:
Selector : A General Python Library for Diverse Subset Selection. J. Chem. Inf. Model. 66(3): 1275-1285 (2026)- 2025
- [j15]Lexin Chen
, Jeremy M. G. Leung, Krisztina Zsigmond, Lillian T. Chong, Ramón Alain Miranda-Quintana:
SHINE: Deterministic Many-to-Many Clustering of Molecular Pathways. J. Chem. Inf. Model. 65(10): 4775-4782 (2025) - [j14]Lexin Chen, Micah Smith, Daniel R. Roe, Ramón Alain Miranda-Quintana:
Extended Quality (eQual): Radial Threshold Clustering Based on n-ary Similarity. J. Chem. Inf. Model. 65(10): 5062-5070 (2025) - [j13]Kenneth López Pérez, Kate Huddleston, Vicky Jung, Ramón Alain Miranda-Quintana:
BitBIRCH Clustering Refinement Strategies. J. Chem. Inf. Model. 65(11): 5280-5288 (2025) - [j12]Kenneth López Pérez, Ramón Alain Miranda-Quintana:
iCliff Taylor's Version: Robust and Efficient Activity Cliff Determination. J. Chem. Inf. Model. 65(11): 5801-5810 (2025) - [j11]Lexin Chen, Jherome Brylle Woody Santos, Jokent T. Gaza, Alberto Pérez, Ramón Alain Miranda-Quintana:
Hierarchical Extended Linkage Method (HELM)'s Deep Dive into Hybrid Clustering Strategies. J. Chem. Inf. Model. 65(12): 6209-6220 (2025) - [j10]Kenneth López Pérez, Edgar López-López, Flavie Soulage, Eloy Felix, José L. Medina-Franco, Ramón Alain Miranda-Quintana:
Growth vs Diversity: A Time-Evolution Analysis of the Chemical Space. J. Chem. Inf. Model. 65(13): 6788-6796 (2025) - [j9]Kenneth López Pérez, Bill Zhao, Ramón Alain Miranda-Quintana:
iSIM-Sigma: Efficient Standard Deviation Calculation for Molecular Similarity. J. Chem. Inf. Model. 65(13): 6797-6808 (2025) - [j8]Lexin Chen, Daniel R. Roe, Ramón Alain Miranda-Quintana:
CADENCE: Clustering Algorithm─Density-Based Exploration and Novelty Clustering with Efficiency. J. Chem. Inf. Model. 65(13): 6968-6975 (2025) - 2023
- [j7]Taewon David Kim, Michael Richer, Gabriela Sánchez-Díaz, Ramón Alain Miranda-Quintana, Toon Verstraelen, Farnaz Heidar-Zadeh, Paul W. Ayers:
Fanpy: A python library for prototyping multideterminant methods in ab initio quantum chemistry. J. Comput. Chem. 44(5): 697-709 (2023) - 2022
- [j6]Anita Rácz, Timothy B. Dunn, Dávid Bajusz, Taewon David Kim, Ramón Alain Miranda-Quintana, Károly Héberger:
Extended continuous similarity indices: theory and application for QSAR descriptor selection. J. Comput. Aided Mol. Des. 36(3): 157-173 (2022) - [j5]Jürgen Bajorath, Ana L. Chávez-Hernández, Miquel Duran-Frigola, Eli Fernández-de Gortari, Johann Gasteiger, Edgar López-López, Gerald M. Maggiora, José L. Medina-Franco, Oscar Méndez-Lucio, Jordi Mestres, Ramón Alain Miranda-Quintana, Tudor I. Oprea, Fabien Plisson, Fernando D. Prieto-Martínez, Raquel Rodríguez-Pérez, Paola Rondón-Villarreal, Fernanda I. Saldívar-González, Norberto Sánchez-Cruz, Marilia Valli:
Chemoinformatics and artificial intelligence colloquium: progress and challenges in developing bioactive compounds. J. Cheminformatics 14(1): 82 (2022) - [j4]Timothy B. Dunn, Gustavo de M. Seabra, Taewon David Kim, K. Eurídice Juárez-Mercado, Chenglong Li, José L. Medina-Franco, Ramón Alain Miranda-Quintana:
Diversity and Chemical Library Networks of Large Data Sets. J. Chem. Inf. Model. 62(9): 2186-2201 (2022) - [j3]Anita Rácz, Levente M. Mihalovits, Dávid Bajusz, Károly Héberger, Ramón Alain Miranda-Quintana:
Molecular Dynamics Simulations and Diversity Selection by Extended Continuous Similarity Indices. J. Chem. Inf. Model. 62(14): 3415-3425 (2022) - 2021
- [j2]Ramón Alain Miranda-Quintana, Dávid Bajusz, Anita Rácz, Károly Héberger:
Extended similarity indices: the benefits of comparing more than two objects simultaneously. Part 1: Theory and characteristics†. J. Cheminformatics 13(1): 32 (2021) - [j1]Ramón Alain Miranda-Quintana, Anita Rácz, Dávid Bajusz, Károly Héberger:
Extended similarity indices: the benefits of comparing more than two objects simultaneously. Part 2: speed, consistency, diversity selection. J. Cheminformatics 13(1): 33 (2021)
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