BibTeX records: Minzhu Xie

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@article{DBLP:journals/bspc/ZhangXL25,
  author       = {Rong Zhang and
                  Minzhu Xie and
                  Qizhi Liu},
  title        = {CFRA-Net: Fusing coarse-to-fine refinement and reverse attention for
                  lesion segmentation in medical images},
  journal      = {Biomed. Signal Process. Control.},
  volume       = {109},
  pages        = {107997},
  year         = {2025},
  url          = {https://doi.org/10.1016/j.bspc.2025.107997},
  doi          = {10.1016/J.BSPC.2025.107997},
  timestamp    = {Mon, 23 Jun 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bspc/ZhangXL25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mlc/WangX25,
  author       = {Tao Wang and
                  Minzhu Xie},
  title        = {{IBBA:} an improved binary bat algorithm for solving low and high-dimensional
                  feature selection problems},
  journal      = {Int. J. Mach. Learn. Cybern.},
  volume       = {16},
  number       = {9},
  pages        = {5605--5635},
  year         = {2025},
  url          = {https://doi.org/10.1007/s13042-025-02588-y},
  doi          = {10.1007/S13042-025-02588-Y},
  timestamp    = {Thu, 25 Sep 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mlc/WangX25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icic/ZhaoXLX25,
  author       = {Zhanhong Zhao and
                  Minzhu Xie and
                  Qizhi Liu and
                  Ruijie Xie},
  editor       = {De{-}Shuang Huang and
                  Haiming Chen and
                  Bo Li and
                  Qinhu Zhang},
  title        = {scGECA: {A} Graph Embedded Representation Learning Approach with Dynamic
                  Attention Mechanism for Single-Cell Clustering},
  booktitle    = {Advanced Intelligent Computing Technology and Applications - 21st
                  International Conference, {ICIC} 2025, Ningbo, China, July 26-29,
                  2025, Proceedings, Part {XXVI}},
  series       = {Lecture Notes in Computer Science},
  volume       = {15867},
  pages        = {419--430},
  publisher    = {Springer},
  year         = {2025},
  url          = {https://doi.org/10.1007/978-981-95-0030-7\_36},
  doi          = {10.1007/978-981-95-0030-7\_36},
  timestamp    = {Mon, 04 Aug 2025 08:04:02 +0200},
  biburl       = {https://dblp.org/rec/conf/icic/ZhaoXLX25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XieDK25,
  author       = {Minzhu Xie and
                  Dongze Deng and
                  Yabin Kuang},
  editor       = {Jing Tang and
                  Xin Lai and
                  Zhipeng Cai and
                  Wei Peng and
                  Yanjie Wei},
  title        = {Drug-Target Interaction Prediction via Substructure Similarity-Guided
                  Denoising and Hierarchical Feature Fusion},
  booktitle    = {Bioinformatics Research and Applications - 21st International Symposium,
                  {ISBRA} 2025, Helsinki, Finland, August 3-5, 2025, Proceedings, Part
                  {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {15757},
  pages        = {295--306},
  publisher    = {Springer},
  year         = {2025},
  url          = {https://doi.org/10.1007/978-981-95-0695-8\_24},
  doi          = {10.1007/978-981-95-0695-8\_24},
  timestamp    = {Thu, 11 Sep 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbra/XieDK25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KuangX24,
  author       = {Yabin Kuang and
                  Minzhu Xie},
  title        = {DrugDoctor: enhancing drug recommendation in cold-start scenario via
                  visit-level representation learning and training},
  journal      = {Briefings Bioinform.},
  volume       = {25},
  number       = {6},
  year         = {2024},
  url          = {https://doi.org/10.1093/bib/bbae464},
  doi          = {10.1093/BIB/BBAE464},
  timestamp    = {Mon, 15 Dec 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bib/KuangX24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieKSB24,
  author       = {Minzhu Xie and
                  Yabin Kuang and
                  Mengyun Song and
                  Ergude Bao},
  title        = {Subtype-MGTP: a cancer subtype identification framework based on multi-omics
                  translation},
  journal      = {Bioinform.},
  volume       = {40},
  number       = {6},
  year         = {2024},
  url          = {https://doi.org/10.1093/bioinformatics/btae360},
  doi          = {10.1093/BIOINFORMATICS/BTAE360},
  timestamp    = {Sun, 01 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XieKSB24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/YiX24,
  author       = {Zhou Yi and
                  Minzhu Xie},
  title        = {Polypharmacy side effect prediction based on semi-implicit graph variational
                  auto-encoder},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {22},
  number       = {4},
  pages        = {2450020:1--2450020:15},
  year         = {2024},
  url          = {https://doi.org/10.1142/S0219720024500203},
  doi          = {10.1142/S0219720024500203},
  timestamp    = {Tue, 22 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/YiX24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/SongWKX24,
  author       = {Mengyun Song and
                  Jie Wen and
                  Yabin Kuang and
                  Minzhu Xie},
  editor       = {Mario Cannataro and
                  Huiru Jane Zheng and
                  Lin Gao and
                  Jianlin Cheng and
                  Jo{\~{a}}o Lu{\'{\i}}s de Miranda and
                  Ester Zumpano and
                  Xiaohua Hu and
                  Young{-}Rae Cho and
                  Taesung Park},
  title        = {{EPI-RMDL:} Prediction of Enhancer-Promoter Interactions Based on
                  RoFormer Mechanism and Deep Learning},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2024, Lisbon, Portugal, December 3-6, 2024},
  pages        = {357--362},
  publisher    = {{IEEE}},
  year         = {2024},
  url          = {https://doi.org/10.1109/BIBM62325.2024.10821931},
  doi          = {10.1109/BIBM62325.2024.10821931},
  timestamp    = {Mon, 03 Feb 2025 17:16:55 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/SongWKX24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhangX24,
  author       = {Rong Zhang and
                  Minzhu Xie},
  editor       = {Mario Cannataro and
                  Huiru Jane Zheng and
                  Lin Gao and
                  Jianlin Cheng and
                  Jo{\~{a}}o Lu{\'{\i}}s de Miranda and
                  Ester Zumpano and
                  Xiaohua Hu and
                  Young{-}Rae Cho and
                  Taesung Park},
  title        = {A Multi-task learning model with low-level feature sharing and inter-feature
                  guidance for segmentation and classification of medical images},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2024, Lisbon, Portugal, December 3-6, 2024},
  pages        = {2894--2899},
  publisher    = {{IEEE}},
  year         = {2024},
  url          = {https://doi.org/10.1109/BIBM62325.2024.10822173},
  doi          = {10.1109/BIBM62325.2024.10822173},
  timestamp    = {Mon, 03 Feb 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/ZhangX24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangX23,
  author       = {Junjun Zhang and
                  Minzhu Xie},
  title        = {Graph regularized non-negative matrix factorization with L\({}_{\mbox{2,1}}\)
                  norm regularization terms for drug-target interactions prediction},
  journal      = {{BMC} Bioinform.},
  volume       = {24},
  number       = {1},
  pages        = {375},
  year         = {2023},
  url          = {https://doi.org/10.1186/s12859-023-05496-6},
  doi          = {10.1186/S12859-023-05496-6},
  timestamp    = {Fri, 06 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ZhangX23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/KuangX23,
  author       = {Yabin Kuang and
                  Minzhu Xie},
  editor       = {Xingpeng Jiang and
                  Haiying Wang and
                  Reda Alhajj and
                  Xiaohua Hu and
                  Felix Engel and
                  Mufti Mahmud and
                  Nadia Pisanti and
                  Xuefeng Cui and
                  Hong Song},
  title        = {Subtype-DCGCN: an unsupervised approach for cancer subtype diagnosis
                  based on multi-omics data},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023},
  pages        = {554--559},
  publisher    = {{IEEE}},
  year         = {2023},
  url          = {https://doi.org/10.1109/BIBM58861.2023.10385294},
  doi          = {10.1109/BIBM58861.2023.10385294},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bibm/KuangX23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/ZhangX22a,
  author       = {Junjun Zhang and
                  Minzhu Xie},
  title        = {{NNDSVD-GRMF:} {A} Graph Dual Regularization Matrix Factorization
                  Method Using Non-Negative Initialization for Predicting Drug-Target
                  Interactions},
  journal      = {{IEEE} Access},
  volume       = {10},
  pages        = {91235--91244},
  year         = {2022},
  url          = {https://doi.org/10.1109/ACCESS.2022.3199667},
  doi          = {10.1109/ACCESS.2022.3199667},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/access/ZhangX22a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangX22,
  author       = {Junjun Zhang and
                  Minzhu Xie},
  title        = {Graph regularized non-negative matrix factorization with prior knowledge
                  consistency constraint for drug-target interactions prediction},
  journal      = {{BMC} Bioinform.},
  volume       = {23},
  number       = {1},
  pages        = {564},
  year         = {2022},
  url          = {https://doi.org/10.1186/s12859-022-05119-6},
  doi          = {10.1186/S12859-022-05119-6},
  timestamp    = {Thu, 11 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ZhangX22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XieLZOL22,
  author       = {Minzhu Xie and
                  Xiaowen Lei and
                  Jiancheng Zhong and
                  Jianxing Ouyang and
                  Guijing Li},
  title        = {Drug response prediction using graph representation learning and Laplacian
                  feature selection},
  journal      = {{BMC} Bioinform.},
  volume       = {23-S},
  number       = {8},
  pages        = {532},
  year         = {2022},
  url          = {https://doi.org/10.1186/s12859-022-05080-4},
  doi          = {10.1186/S12859-022-05080-4},
  timestamp    = {Sun, 25 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/XieLZOL22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhongSXPZWW21,
  author       = {Jiancheng Zhong and
                  Yusui Sun and
                  Minzhu Xie and
                  Wei Peng and
                  Chushu Zhang and
                  Fang{-}Xiang Wu and
                  Jianxin Wang},
  title        = {Proteoform characterization based on top-down mass spectrometry},
  journal      = {Briefings Bioinform.},
  volume       = {22},
  number       = {2},
  pages        = {1729--1750},
  year         = {2021},
  url          = {https://doi.org/10.1093/bib/bbaa015},
  doi          = {10.1093/BIB/BBAA015},
  timestamp    = {Tue, 16 Dec 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bib/ZhongSXPZWW21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShawCXJ21,
  author       = {Dipan Shaw and
                  Hao Chen and
                  Minzhu Xie and
                  Tao Jiang},
  title        = {DeepLPI: a multimodal deep learning method for predicting the interactions
                  between lncRNAs and protein isoforms},
  journal      = {{BMC} Bioinform.},
  volume       = {22},
  number       = {1},
  pages        = {24},
  year         = {2021},
  url          = {https://doi.org/10.1186/s12859-020-03914-7},
  doi          = {10.1186/S12859-020-03914-7},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ShawCXJ21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhongTPXSTXY21,
  author       = {Jiancheng Zhong and
                  Chao Tang and
                  Wei Peng and
                  Minzhu Xie and
                  Yusui Sun and
                  Qiang Tang and
                  Qiu Xiao and
                  Jiahong Yang},
  title        = {A novel essential protein identification method based on {PPI} networks
                  and gene expression data},
  journal      = {{BMC} Bioinform.},
  volume       = {22},
  number       = {1},
  pages        = {248},
  year         = {2021},
  url          = {https://doi.org/10.1186/s12859-021-04175-8},
  doi          = {10.1186/S12859-021-04175-8},
  timestamp    = {Thu, 26 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ZhongTPXSTXY21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe2/XieL21,
  author       = {Minzhu Xie and
                  Fang Liu},
  title        = {Overview of Machine Learning Methods for Genome-Wide Association Analysis},
  booktitle    = {{BIBE} 2021: The Fifth International Conference on Biological Information
                  and Biomedical Engineering, Hangzhou, China, July 20-22, 2021},
  pages        = {4:1--4:7},
  publisher    = {{ACM}},
  year         = {2021},
  url          = {https://doi.org/10.1145/3469678.3469682},
  doi          = {10.1145/3469678.3469682},
  timestamp    = {Wed, 04 Aug 2021 15:24:04 +0200},
  biburl       = {https://dblp.org/rec/conf/bibe2/XieL21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuLZXFJ20,
  author       = {Chencheng Xu and
                  Qiao Liu and
                  Jianyu Zhou and
                  Minzhu Xie and
                  Jianxing Feng and
                  Tao Jiang},
  title        = {Quantifying functional impact of non-coding variants with multi-task
                  Bayesian neural network},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {5},
  pages        = {1397--1404},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btz767},
  doi          = {10.1093/BIOINFORMATICS/BTZ767},
  timestamp    = {Mon, 10 Feb 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XuLZXFJ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/OuyangXL19,
  author       = {Jianxing Ouyang and
                  Minzhu Xie and
                  Xinqiu Liu},
  title        = {{DIMDRP:} {A} Double Iteration Method for Drug Response Prediction},
  journal      = {{IEEE} Access},
  volume       = {7},
  pages        = {140224--140232},
  year         = {2019},
  url          = {https://doi.org/10.1109/ACCESS.2019.2942217},
  doi          = {10.1109/ACCESS.2019.2942217},
  timestamp    = {Thu, 07 Nov 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/access/OuyangXL19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/TangPX17,
  author       = {Xiwei Tang and
                  Wei Peng and
                  Minzhu Xie},
  title        = {Iteration method for detecting disease genes in terms of the integration
                  of the cellular compartment information with the protein-protein interaction
                  data},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {18},
  number       = {4},
  pages        = {315--330},
  year         = {2017},
  url          = {https://doi.org/10.1504/IJDMB.2017.10009355},
  doi          = {10.1504/IJDMB.2017.10009355},
  timestamp    = {Wed, 18 Sep 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijdmb/TangPX17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieWWJ16,
  author       = {Minzhu Xie and
                  Qiong Wu and
                  Jianxin Wang and
                  Tao Jiang},
  title        = {H-PoP and H-PoPG: heuristic partitioning algorithms for single individual
                  haplotyping of polyploids},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {24},
  pages        = {3735--3744},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw537},
  doi          = {10.1093/BIOINFORMATICS/BTW537},
  timestamp    = {Fri, 02 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XieWWJ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/TangYLHZPX16,
  author       = {Xiwei Tang and
                  Xuejun Yang and
                  Yongfan Li and
                  Wei Hu and
                  Ming{-}Cai Zheng and
                  Wei Peng and
                  Minzhu Xie},
  title        = {Identification of essential proteins via the network topology feature
                  and subcellular localisation},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {16},
  number       = {4},
  pages        = {328--344},
  year         = {2016},
  url          = {https://doi.org/10.1504/IJDMB.2016.10003178},
  doi          = {10.1504/IJDMB.2016.10003178},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijdmb/TangYLHZPX16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DingWZGXP15,
  author       = {Xiaojun Ding and
                  Jianxin Wang and
                  Alex Zelikovsky and
                  Xuan Guo and
                  Minzhu Xie and
                  Yi Pan},
  title        = {Searching High-Order {SNP} Combinations for Complex Diseases Based
                  on Energy Distribution Difference},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {12},
  number       = {3},
  pages        = {695--704},
  year         = {2015},
  url          = {https://doi.org/10.1109/TCBB.2014.2363459},
  doi          = {10.1109/TCBB.2014.2363459},
  timestamp    = {Sat, 10 Jan 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcbb/DingWZGXP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/XieWC15,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Xin Chen},
  title        = {{LGH:} {A} Fast and Accurate Algorithm for Single Individual Haplotyping
                  Based on a Two-Locus Linkage Graph},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {12},
  number       = {6},
  pages        = {1255--1266},
  year         = {2015},
  url          = {https://doi.org/10.1109/TCBB.2015.2430352},
  doi          = {10.1109/TCBB.2015.2430352},
  timestamp    = {Mon, 25 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcbb/XieWC15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/XieW13,
  author       = {Minzhu Xie and
                  Jing Wang},
  title        = {Parameterised algorithms of the individual haplotyping problem with
                  gaps},
  journal      = {Int. J. Bioinform. Res. Appl.},
  volume       = {9},
  number       = {1},
  pages        = {25--40},
  year         = {2013},
  url          = {https://doi.org/10.1504/IJBRA.2013.050746},
  doi          = {10.1504/IJBRA.2013.050746},
  timestamp    = {Fri, 11 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbra/XieW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmei/YangX13,
  author       = {Yang Yang and
                  Minzhu Xie},
  editor       = {Jean X. Gao and
                  Dongrong Xu and
                  Xiaoyan Sun and
                  Yingfei Wu},
  title        = {A parameterized enumeration algorithm for the haplotype assembly problem},
  booktitle    = {6th International Conference on Biomedical Engineering and Informatics,
                  {BMEI} 2013, Hangzhou, China, December 16-18, 2013},
  pages        = {455--459},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/BMEI.2013.6746986},
  doi          = {10.1109/BMEI.2013.6746986},
  timestamp    = {Thu, 04 Sep 2025 17:58:10 +0200},
  biburl       = {https://dblp.org/rec/conf/bmei/YangX13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieLJ12,
  author       = {Minzhu Xie and
                  Jing Li and
                  Tao Jiang},
  title        = {Detecting genome-wide epistases based on the clustering of relatively
                  frequent items},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {1},
  pages        = {5--12},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/btr603},
  doi          = {10.1093/BIOINFORMATICS/BTR603},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XieLJ12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/XieWJ12,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Tao Jiang},
  title        = {A fast and accurate algorithm for single individual haplotyping},
  journal      = {{BMC} Syst. Biol.},
  volume       = {6},
  number       = {{S-2}},
  pages        = {S8},
  year         = {2012},
  url          = {https://doi.org/10.1186/1752-0509-6-S2-S8},
  doi          = {10.1186/1752-0509-6-S2-S8},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/XieWJ12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/WangXC10,
  author       = {Jianxin Wang and
                  Minzhu Xie and
                  Jianer Chen},
  title        = {A Practical Exact Algorithm for the Individual Haplotyping Problem
                  {MEC/GI}},
  journal      = {Algorithmica},
  volume       = {56},
  number       = {3},
  pages        = {283--296},
  year         = {2010},
  url          = {https://doi.org/10.1007/s00453-009-9288-1},
  doi          = {10.1007/S00453-009-9288-1},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithmica/WangXC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Xie0J10,
  author       = {Minzhu Xie and
                  Jing Li and
                  Tao Jiang},
  title        = {Accurate {HLA} type inference using a weighted similarity graph},
  journal      = {{BMC} Bioinform.},
  volume       = {11},
  number       = {{S-11}},
  pages        = {S10},
  year         = {2010},
  url          = {https://doi.org/10.1186/1471-2105-11-S11-S10},
  doi          = {10.1186/1471-2105-11-S11-S10},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/Xie0J10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mscs/XieWC10,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Jianer Chen},
  title        = {A practical parameterised algorithm for the individual haplotyping
                  problem {MLF}},
  journal      = {Math. Struct. Comput. Sci.},
  volume       = {20},
  number       = {5},
  pages        = {851--863},
  year         = {2010},
  url          = {https://doi.org/10.1017/S096012951000023X},
  doi          = {10.1017/S096012951000023X},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mscs/XieWC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/XieW08,
  author       = {Minzhu Xie and
                  Jianxin Wang},
  title        = {An Improved (and Practical) Parameterized Algorithm for the Individual
                  Haplotyping Problem {MFR} with Mate-Pairs},
  journal      = {Algorithmica},
  volume       = {52},
  number       = {2},
  pages        = {250--266},
  year         = {2008},
  url          = {https://doi.org/10.1007/s00453-007-9150-2},
  doi          = {10.1007/S00453-007-9150-2},
  timestamp    = {Wed, 27 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithmica/XieW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmei/XieWC08,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Jianer Chen},
  title        = {A Practical Exact Algorithm for the Individual Haplotyping Problem
                  {MEC}},
  booktitle    = {Proceedings of the 2008 International Conference on BioMedical Engineering
                  and Informatics, {BMEI} 2008, May 28-30, 2008, Sanya, Hainan, China
                  - Volume 1},
  pages        = {72--76},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/BMEI.2008.122},
  doi          = {10.1109/BMEI.2008.122},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bmei/XieWC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/XieWC08,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Jianer Chen},
  editor       = {Xiaodong Hu and
                  Jie Wang},
  title        = {A Practical Exact Algorithm for the Individual Haplotyping Problem
                  {MEC/GI}},
  booktitle    = {Computing and Combinatorics, 14th Annual International Conference,
                  {COCOON} 2008, Dalian, China, June 27-29, 2008, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5092},
  pages        = {342--351},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69733-6\_34},
  doi          = {10.1007/978-3-540-69733-6\_34},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cocoon/XieWC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/faw/XieWZC08,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Wei Zhou and
                  Jianer Chen},
  editor       = {Franco P. Preparata and
                  Xiaodong Wu and
                  Jianping Yin},
  title        = {A Practical Parameterized Algorithm for Weighted Minimum Letter Flips
                  Model of the Individual Haplotyping Problem},
  booktitle    = {Frontiers in Algorithmics, Second Annual International Workshop, {FAW}
                  2008, Changsha, China, June 19-21, 2008, Proceeedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5059},
  pages        = {16--27},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69311-6\_5},
  doi          = {10.1007/978-3-540-69311-6\_5},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/faw/XieWZC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/XieWC08,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Jianer Chen},
  title        = {A model of higher accuracy for the individual haplotyping problem
                  based on weighted {SNP} fragments and genotype with errors},
  booktitle    = {Proceedings 16th International Conference on Intelligent Systems for
                  Molecular Biology (ISMB), Toronto, Canada, July 19-23, 2008},
  pages        = {105--113},
  year         = {2008},
  url          = {https://doi.org/10.1093/bioinformatics/btn147},
  doi          = {10.1093/BIOINFORMATICS/BTN147},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ismb/XieWC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tamc/XieWC08,
  author       = {Minzhu Xie and
                  Jianxin Wang and
                  Jianer Chen},
  editor       = {Manindra Agrawal and
                  Ding{-}Zhu Du and
                  Zhenhua Duan and
                  Angsheng Li},
  title        = {A Practical Parameterized Algorithm for the Individual Haplotyping
                  Problem {MLF}},
  booktitle    = {Theory and Applications of Models of Computation, 5th International
                  Conference, {TAMC} 2008, Xi'an, China, April 25-29, 2008. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4978},
  pages        = {433--444},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-79228-4\_38},
  doi          = {10.1007/978-3-540-79228-4\_38},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/tamc/XieWC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/XieCW07,
  author       = {Minzhu Xie and
                  Jianer Chen and
                  Jianxin Wang},
  title        = {Research on Parameterized Algorithms of the Individual Haplotyping
                  Problem},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {5},
  number       = {3},
  pages        = {795--816},
  year         = {2007},
  url          = {https://doi.org/10.1142/S0219720007002710},
  doi          = {10.1142/S0219720007002710},
  timestamp    = {Fri, 21 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/XieCW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}