Instead of requiring developers to explicitly put autoloads in extensions.json, PSR-4 should be used.
For example, if I put the methods for hooks in the HitCountersHooks class and the HitCountersHooks.php file contains that class, I should not have to specify the following in extension.json:
"AutoloadClasses": { "HitCountersHooks": "HitCountersHooks.php" }