PPRC1: Difference between revisions

PPRC1
Identifiers
Aliases	PPRC1, PRC, peroxisome proliferator-activated receptor gamma, coactivator-related 1, PPARG related coactivator 1
External IDs	OMIM: 617462; MGI: 2385096; HomoloGene: 9006; GeneCards: PPRC1; OMA:PPRC1 - orthologs
Gene location (Human)
Chr.	Chromosome 10 (human)
End	102,150,333 bp
Gene location (Mouse)
Chr.	Chromosome 19 (mouse)
End	46,061,354 bp
RNA expression pattern
	Top expressed in
	left uterine tube; ; oocyte; ; skin of abdomen; ; upper lobe of left lung; ; left ovary; ; right ovary; ; anterior pituitary; ; secondary oocyte; ; skin of leg; ; gonad;
	Top expressed in
	otic placode; ; epiblast; ; otic vesicle; ; tail of embryo; ; saccule; ; primitive streak; ; Gonadal ridge; ; human fetus; ; morula; ; morula;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	nuclear receptor coactivator activity; nucleic acid binding; transcription coregulator activity; RNA binding; transcription factor binding;
Cellular component	nucleus; nucleoplasm;
Biological process	positive regulation of DNA-binding transcription factor activity; mitochondrion organization; positive regulation of transcription by RNA polymerase II; transcription, DNA-templated; regulation of transcription, DNA-templated;
	Sources:Amigo / QuickGO
Orthologs
	23082
	226169
	ENSG00000148840
	ENSMUSG00000055491
	Q5VV67
	Q6NZN1
	NM_001288727; NM_001288728; NM_015062
	NM_001081214; NM_145504; NM_001346801
	NP_001275656; NP_001275657; NP_055877
	NP_001074683; NP_001333730
	Wikidata
View/Edit Human	View/Edit Mouse

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Latest revision as of 14:44, 3 December 2023

Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 is a protein that in humans is encoded by the PPRC1 gene.^[5]^[6]^[7]

The protein encoded by this gene is similar to PPAR-gamma coactivator 1 (PPARGC1/PGC-1), a protein that can activate mitochondrial biogenesis in part through a direct interaction with nuclear respiratory factor 1 (NRF1). This protein has been shown to interact with NRF1. It is thought to be a functional relative of PPARGC1 that activates mitochondrial biogenesis through NRF1 in response to proliferative signals.^[7]

Interactions

PPRC1 has been shown to interact with USF2.^[8]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000148840 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000055491 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Nagase T, Ishikawa K, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Aug 1998). "Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 5 (1): 31–9. doi:10.1093/dnares/5.1.31. PMID 9628581.
^ Andersson U, Scarpulla RC (May 2001). "PGC-1-Related Coactivator, a Novel, Serum-Inducible Coactivator of Nuclear Respiratory Factor 1-Dependent Transcription in Mammalian Cells". Mol Cell Biol. 21 (11): 3738–49. doi:10.1128/MCB.21.11.3738-3749.2001. PMC 87014. PMID 11340167.
^ ^a ^b "Entrez Gene: PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1".
^ Moore, Meredith L; Park Edwards A; McMillin Jeanie B (May 2003). "Upstream stimulatory factor represses the induction of carnitine palmitoyltransferase-Ibeta expression by PGC-1". J. Biol. Chem. 278 (19). United States: 17263–8. doi:10.1074/jbc.M210486200. ISSN 0021-9258. PMID 12611894.

Finck BN, Kelly DP (2006). "PGC-1 coactivators: inducible regulators of energy metabolism in health and disease". J. Clin. Invest. 116 (3): 615–22. doi:10.1172/JCI27794. PMC 1386111. PMID 16511594.
Yamagata K, Yoshimochi K, Daitoku H, et al. (2007). "Bile acid represses the peroxisome proliferator-activated receptor-gamma coactivator-1 promoter activity in a small heterodimer partner-dependent manner". Int. J. Mol. Med. 19 (5): 751–6. doi:10.3892/ijmm.19.5.751. PMID 17390079.
Srivastava S, Barrett JN, Moraes CT (2007). "PGC-1α/β upregulation is associated with improved oxidative phosphorylation in cells harboring nonsense mtDNA mutations". Hum. Mol. Genet. 16 (8): 993–1005. doi:10.1093/hmg/ddm045. PMC 2652746. PMID 17341490.
Gleyzer N, Vercauteren K, Scarpulla RC (2005). "Control of Mitochondrial Transcription Specificity Factors (TFB1M and TFB2M) by Nuclear Respiratory Factors (NRF-1 and NRF-2) and PGC-1 Family Coactivators". Mol. Cell. Biol. 25 (4): 1354–66. doi:10.1128/MCB.25.4.1354-1366.2005. PMC 548005. PMID 15684387.
Yamamoto T, Shimano H, Nakagawa Y, et al. (2004). "SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes". J. Biol. Chem. 279 (13): 12027–35. doi:10.1074/jbc.M310333200. PMID 14722127.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Savagner F, Mirebeau D, Jacques C, et al. (2003). "PGC-1-related coactivator and targets are upregulated in thyroid oncocytoma". Biochem. Biophys. Res. Commun. 310 (3): 779–84. doi:10.1016/j.bbrc.2003.09.076. PMID 14550271.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Scarpulla RC (2002). "Transcriptional activators and coactivators in the nuclear control of mitochondrial function in mammalian cells". Gene. 286 (1): 81–9. doi:10.1016/S0378-1119(01)00809-5. PMID 11943463.
Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.

This article on a gene on human chromosome 10 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000148840 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000055491 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9628581-5] Nagase T, Ishikawa K, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Aug 1998). "Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 5 (1): 31–9. doi:10.1093/dnares/5.1.31. PMID 9628581.

[pmid11340167-6] Andersson U, Scarpulla RC (May 2001). "PGC-1-Related Coactivator, a Novel, Serum-Inducible Coactivator of Nuclear Respiratory Factor 1-Dependent Transcription in Mammalian Cells". Mol Cell Biol. 21 (11): 3738–49. doi:10.1128/MCB.21.11.3738-3749.2001. PMC 87014. PMID 11340167.

[entrez-7] "Entrez Gene: PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1".

[pmid12611894-8] Moore, Meredith L; Park Edwards A; McMillin Jeanie B (May 2003). "Upstream stimulatory factor represses the induction of carnitine palmitoyltransferase-Ibeta expression by PGC-1". J. Biol. Chem. 278 (19). United States: 17263–8. doi:10.1074/jbc.M210486200. ISSN 0021-9258. PMID 12611894.

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@@ Line 1: / Line 1: @@
+{{Short description|Protein-coding gene in the species Homo sapiens}}
-{{Orphan|date=February 2009}}
+{{Infobox_gene}}
-{{PBB|geneid=23082}}
-'''Peroxisome proliferator-activated receptor gamma coactivator-related protein 1''' is a [[protein]] that in humans is encoded by the ''PPRC1'' [[gene]].<ref name="pmid9628581">{{cite journal | author = Nagase T, Ishikawa K, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O | title = Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro | journal = DNA Res | volume = 5 | issue = 1 | pages = 31-9 | year = 1998 | month = Aug | pmid = 9628581 | pmc =  | doi =  }}</ref><ref name="pmid11340167">{{cite journal | author = Andersson U, Scarpulla RC | title = Pgc-1-related coactivator, a novel, serum-inducible coactivator of nuclear respiratory factor 1-dependent transcription in mammalian cells | journal = Mol Cell Biol | volume = 21 | issue = 11 | pages = 3738-49 | year = 2001 | month = May | pmid = 11340167 | pmc = 87014 | doi = 10.1128/MCB.21.11.3738-3749.2001 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23082| accessdate = }}</ref>
+'''Peroxisome proliferator-activated receptor gamma coactivator-related protein 1''' is a [[protein]] that in humans is encoded by the ''PPRC1'' [[gene]].<ref name="pmid9628581">{{cite journal |vauthors=Nagase T, Ishikawa K, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O | title = Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro | journal = DNA Res | volume = 5 | issue = 1 | pages = 31–9 |date=Aug 1998 | pmid = 9628581 | doi =10.1093/dnares/5.1.31  | doi-access = free }}</ref><ref name="pmid11340167">{{cite journal |vauthors=Andersson U, Scarpulla RC | title = PGC-1-Related Coactivator, a Novel, Serum-Inducible Coactivator of Nuclear Respiratory Factor 1-Dependent Transcription in Mammalian Cells | journal = Mol Cell Biol | volume = 21 | issue = 11 | pages = 3738–49 |date=May 2001 | pmid = 11340167 | pmc = 87014 | doi = 10.1128/MCB.21.11.3738-3749.2001 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23082}}</ref>
+The protein encoded by this gene is similar to PPAR-gamma coactivator 1 (PPARGC1/PGC-1), a protein that can activate mitochondrial biogenesis in part through a direct interaction with nuclear respiratory factor 1 (NRF1). This protein has been shown to interact with NRF1. It is thought to be a functional relative of PPARGC1 that activates mitochondrial biogenesis through NRF1 in response to proliferative signals.<ref name="entrez" />
-<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
-{{PBB_Summary
-| section_title =
-| summary_text = The protein encoded by this gene is similar to PPAR-gamma coactivator 1 (PPARGC1/PGC-1), a protein that can activate mitochondrial biogenesis in part through a direct interaction with nuclear respiratory factor 1 (NRF1). This protein has been shown to interact with NRF1. It is thought to be a functional relative of PPARGC1 that activates mitochondrial biogenesis through NRF1 in response to proliferative signals.<ref name="entrez">{{cite web | title = Entrez Gene: PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23082| accessdate = }}</ref>
-}}
 ==Interactions==
-PPRC1 has been shown to [[Protein-protein_interaction|interact]] with [[USF2]].<ref name=pmid12611894>{{cite journal | quotes = yes |last=Moore |first=Meredith L |authorlink= |coauthors=Park Edwards A, McMillin Jeanie B |year=[[2003]]|month=May. |title=Upstream stimulatory factor represses the induction of carnitine palmitoyltransferase-Ibeta expression by PGC-1 |journal=J. Biol. Chem. |volume=278 |issue=19 |pages=17263-8 |publisher= |location = United States| issn = 0021-9258| pmid = 12611894 |doi = 10.1074/jbc.M210486200 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref>
+PPRC1 has been shown to [[Protein-protein interaction|interact]] with [[USF2]].<ref name=pmid12611894>{{cite journal |last=Moore |first=Meredith L |author2=Park Edwards A |author3=McMillin Jeanie B  |date=May 2003 |title=Upstream stimulatory factor represses the induction of carnitine palmitoyltransferase-Ibeta expression by PGC-1 |journal=J. Biol. Chem. |volume=278 |issue=19 |pages=17263–8 |location = United States| issn = 0021-9258| pmid = 12611894 |doi = 10.1074/jbc.M210486200 |doi-access=free }}</ref>
 ==References==
 {{reflist}}
 ==Further reading==
 {{refbegin | 2}}
+*{{cite journal  |vauthors=Finck BN, Kelly DP |title=PGC-1 coactivators: inducible regulators of energy metabolism in health and disease |journal=J. Clin. Invest. |volume=116 |issue= 3 |pages= 615–22 |year= 2006 |pmid= 16511594 |doi= 10.1172/JCI27794  | pmc=1386111 }}
-{{PBB_Further_reading
+*{{cite journal  | author=Yamagata K |title=Bile acid represses the peroxisome proliferator-activated receptor-gamma coactivator-1 promoter activity in a small heterodimer partner-dependent manner |journal=Int. J. Mol. Med. |volume=19 |issue= 5 |pages= 751–6 |year= 2007 |pmid= 17390079 |doi=  10.3892/ijmm.19.5.751|name-list-style=vanc| author2=Yoshimochi K  | author3=Daitoku H  | display-authors=3  | last4=Hirota  | first4=K  | last5=Fukamizu  | first5=A  |doi-access=free}}
-| citations =
-*{{cite journal  | author=Finck BN, Kelly DP |title=PGC-1 coactivators: inducible regulators of energy metabolism in health and disease. |journal=J. Clin. Invest. |volume=116 |issue= 3 |pages= 615–22 |year= 2006 |pmid= 16511594 |doi= 10.1172/JCI27794 }}
+*{{cite journal  |vauthors=Srivastava S, Barrett JN, Moraes CT |title=PGC-1α/β upregulation is associated with improved oxidative phosphorylation in cells harboring nonsense mtDNA mutations |journal=Hum. Mol. Genet. |volume=16 |issue= 8 |pages= 993–1005 |year= 2007 |pmid= 17341490 |doi= 10.1093/hmg/ddm045  | pmc=2652746 }}
-*{{cite journal  | author=Yamagata K, Yoshimochi K, Daitoku H, ''et al.'' |title=Bile acid represses the peroxisome proliferator-activated receptor-gamma coactivator-1 promoter activity in a small heterodimer partner-dependent manner. |journal=Int. J. Mol. Med. |volume=19 |issue= 5 |pages= 751–6 |year= 2007 |pmid= 17390079 |doi=  }}
+*{{cite journal  |vauthors=Gleyzer N, Vercauteren K, Scarpulla RC |title=Control of Mitochondrial Transcription Specificity Factors (TFB1M and TFB2M) by Nuclear Respiratory Factors (NRF-1 and NRF-2) and PGC-1 Family Coactivators |journal=Mol. Cell. Biol. |volume=25 |issue= 4 |pages= 1354–66 |year= 2005 |pmid= 15684387 |doi= 10.1128/MCB.25.4.1354-1366.2005  | pmc=548005 }}
+*{{cite journal  | author=Yamamoto T |title=SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes |journal=J. Biol. Chem. |volume=279 |issue= 13 |pages= 12027–35 |year= 2004 |pmid= 14722127 |doi= 10.1074/jbc.M310333200  |name-list-style=vanc| author2=Shimano H  | author3=Nakagawa Y  | display-authors=3  | last4=Ide  | first4=T  | last5=Yahagi  | first5=N  | last6=Matsuzaka  | first6=T  | last7=Nakakuki  | first7=M  | last8=Takahashi  | first8=A  | last9=Suzuki  | first9=H | doi-access=free  }}
-*{{cite journal  | author=Srivastava S, Barrett JN, Moraes CT |title=PGC-1alpha/beta upregulation is associated with improved oxidative phosphorylation in cells harboring nonsense mtDNA mutations. |journal=Hum. Mol. Genet. |volume=16 |issue= 8 |pages= 993–1005 |year= 2007 |pmid= 17341490 |doi= 10.1093/hmg/ddm045 }}
+*{{cite journal  | author=Ota T |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285  |name-list-style=vanc| author2=Suzuki Y  | author3=Nishikawa T  | display-authors=3  | last4=Otsuki  | first4=Tetsuji  | last5=Sugiyama  | first5=Tomoyasu  | last6=Irie  | first6=Ryotaro  | last7=Wakamatsu  | first7=Ai  | last8=Hayashi  | first8=Koji  | last9=Sato  | first9=Hiroyuki | doi-access=free  }}
-*{{cite journal  | author=Gleyzer N, Vercauteren K, Scarpulla RC |title=Control of mitochondrial transcription specificity factors (TFB1M and TFB2M) by nuclear respiratory factors (NRF-1 and NRF-2) and PGC-1 family coactivators. |journal=Mol. Cell. Biol. |volume=25 |issue= 4 |pages= 1354–66 |year= 2005 |pmid= 15684387 |doi= 10.1128/MCB.25.4.1354-1366.2005 }}
+*{{cite journal  | author=Savagner F |title=PGC-1-related coactivator and targets are upregulated in thyroid oncocytoma |journal=Biochem. Biophys. Res. Commun. |volume=310 |issue= 3 |pages= 779–84 |year= 2003 |pmid= 14550271 |doi=10.1016/j.bbrc.2003.09.076  |name-list-style=vanc| author2=Mirebeau D  | author3=Jacques C  | display-authors=3  | last4=Guyetant  | first4=Serge  | last5=Morgan  | first5=Catherine  | last6=Franc  | first6=Brigitte  | last7=Reynier  | first7=Pascal  | last8=Malthièry  | first8=Yves  }}
-*{{cite journal  | author=Yamamoto T, Shimano H, Nakagawa Y, ''et al.'' |title=SREBP-1 interacts with hepatocyte nuclear factor-4 alpha and interferes with PGC-1 recruitment to suppress hepatic gluconeogenic genes. |journal=J. Biol. Chem. |volume=279 |issue= 13 |pages= 12027–35 |year= 2004 |pmid= 14722127 |doi= 10.1074/jbc.M310333200 }}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal  | author=Strausberg RL |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241  |name-list-style=vanc| author2=Feingold EA  | author3=Grouse LH  | display-authors=3  | last4=Derge  | first4=JG  | last5=Klausner  | first5=RD  | last6=Collins  | first6=FS  | last7=Wagner  | first7=L  | last8=Shenmen  | first8=CM  | last9=Schuler  | first9=GD |bibcode=2002PNAS...9916899M|doi-access=free }}
-*{{cite journal  | author=Savagner F, Mirebeau D, Jacques C, ''et al.'' |title=PGC-1-related coactivator and targets are upregulated in thyroid oncocytoma. |journal=Biochem. Biophys. Res. Commun. |volume=310 |issue= 3 |pages= 779–84 |year= 2003 |pmid= 14550271 |doi=10.1016/j.bbrc.2003.09.076  }}
+*{{cite journal  | author=Scarpulla RC |title=Transcriptional activators and coactivators in the nuclear control of mitochondrial function in mammalian cells |journal=Gene |volume=286 |issue= 1 |pages= 81–9 |year= 2002 |pmid= 11943463 |doi=10.1016/S0378-1119(01)00809-5  }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  |vauthors=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery |journal=Genome Res. |volume=6 |issue= 9 |pages= 791–806 |year= 1997 |pmid= 8889548 |doi=10.1101/gr.6.9.791  |doi-access=free }}
-*{{cite journal  | author=Scarpulla RC |title=Transcriptional activators and coactivators in the nuclear control of mitochondrial function in mammalian cells. |journal=Gene |volume=286 |issue= 1 |pages= 81–9 |year= 2002 |pmid= 11943463 |doi=10.1016/S0378-1119(01)00809-5  }}
-*{{cite journal  | author=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery. |journal=Genome Res. |volume=6 |issue= 9 |pages= 791–806 |year= 1997 |pmid= 8889548 |doi=10.1101/gr.6.9.791  }}
-}}
 {{refend}}
-{{gene-10-stub}}
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