Skip to content

jgstern/STORI

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

16 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

STORI

Selectable Taxon Ortholog Retrieval Iteratively

User Guide: https://tinyurl.com/mr395m6z
Thesis: http://linkd.in/1fZO63l

Introducing single-node STORI

Now STORI should run on any box with bash, Perl, and Python. The initial 2013 release of STORI (this repo) requires a cluster using the job scheduler Moab, RHEL 6.5, and assumes that sequences are identified using only their GI number. But the latest release (linked below) runs on a single node, and is compatible with sequence IDs using the accession.version format. I tested it on CentOS 7.

https://github.com/jgstern/STORI_singlenode

About

Selectable Taxon Ortholog Retrieval Iteratively

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published