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@keller-mark keller-mark commented Dec 15, 2021

Fixes #1119

Depends on scverse/mudata#7

Change List

  • Add MuDataSource class and mudata-*.zarr file types.
    • Can re-use the options schemas from anndata-*.zarr, just now with modality-specific obs/var/X/etc like mod/{modality}/obs/colname

We can then build on this feature and add modality-specific file types and components, such as a chromatin accessibility peak count matrix for a MuData object with mod/atac/X

Checklist

  • Ensure PR works with all demos on the dev.vitessce.io homepage
  • Open (draft) PR's into vitessce-python and vitessce-r if this is a release PR
  • Documentation added or updated

@keller-mark keller-mark marked this pull request as draft December 15, 2021 22:01
@keller-mark keller-mark mentioned this pull request Dec 22, 2022
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MuData-Zarr file types

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