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Commits on Sep 4, 2025

• style: Fix variable names (#3785)

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Commits on Sep 2, 2025

• ci: clean up (#3782)

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Commits on Sep 1, 2025

• refactor: Remove use of deprecated anndata methods (#3779)

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Commits on Aug 25, 2025

• ci: Check PRs for semantic labels (#3772)

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Commits on Aug 21, 2025

• doc: Add missing pl.correlation_matrix API docs (#3762)

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Commits on Aug 19, 2025

• feat: add `filter_unexpressed_genes` parameter to `hvg` (#3767)

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  mumichae

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Commits on Jul 30, 2025

• unbound scipy (#3752)

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• doc: update 2017 clustering tutorial for more Seurat compatibility (#3748)

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• fix: correctly setup initial logging (#3747)

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• (fix): fix igraph on windows (#3745)

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Commits on Jul 24, 2025

• (chore): update PR template

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• (fix): settings.set_figure_params (#3731)

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• (fix): import Version from correct location (#3733)

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Commits on Jul 23, 2025

• Catch all warnings (#3724)

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Commits on Jul 14, 2025

• Fix read_text usage (#3710)

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Commits on Jun 24, 2025

• remove setuptools dep (#3693)

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Commits on Jun 13, 2025

• (chore): extract verbosity (#3683)

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Commits on Jun 10, 2025

• Settings docs overhaul (#3672)

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  ilan-gold

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  e095c46

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• circumvent numba bug (#3679)

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Commits on Jun 6, 2025

• Deprecate louvain (#3658)

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Commits on May 28, 2025

• Fix relnotes

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• (doc): centralize PCA docs (#3655)

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• (fix): temporarily add constraints to fix tests (#3656)

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Commits on May 27, 2025

• slightly modernize settings module (#3650)

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• (fix): correct error message for sparse-in-dask (#3646)

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• (chore): derive CI matrix from hatch env (#3607)

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Commits on May 16, 2025

• Simplify scale (#3351)

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Commits on May 12, 2025

• Switch to fast-array-utils (#3598)

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  rgoya

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Commits on May 5, 2025

• Switch from profimp to tuna for parsing import profiles (#3620)

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Commits on Apr 25, 2025

• sparse array support (#3563)

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  pre-commit-ci[bot]

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  cb83cfc

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• Remove old bounds (#3611)

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Commits on Apr 22, 2025

• Centralize random utils (#3590)

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• (fix): make sphinx search work again (#3604)

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Commits on Apr 17, 2025

• Fix `pp.scale` returning a Dask Array with `np.matrix` chunks (#3597)

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Commits on Apr 14, 2025

• Fix direct links in tutorials (#3585)

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